Education Research Current About VU Amsterdam NL
Login as
Prospective student Student Employee
Bachelor Master VU for Professionals
Exchange programme VU Amsterdam Summer School Honours programme VU-NT2 Semester in Amsterdam
PhD at VU Amsterdam Research highlights Prizes and distinctions
Research institutes Our scientists Research Impact Support Portal Creating impact
News Events calendar Biodiversity at VU Amsterdam
Israël and Palestinian regions Culture on campus
Practical matters Mission and core values Entrepreneurship on VU Campus
Organisation Partnerships Alumni University Library Working at VU Amsterdam
Sorry! De informatie die je zoekt, is enkel beschikbaar in het Engels.
This programme is saved in My Study Choice.
Something went wrong with processing the request.
Something went wrong with processing the request.

Holomicrobiome

The Holomicrobiome project, a pioneering research initiative, is dedicated to studying the microbiomes in our entire food ecosystem. Financed by the Dutch National Growth Fund, the project aims to understand the mechanisms underlying microbiomes, consolidate this knowledge across domains, and support a mission-driven innovation ecosystem.

Background
Microorganisms such as bacteria, fungi, and viruses, are all around us. Billions of them inhabit our intestines, skin, soil, and water, as well as fermented foods. Microorganisms, compete or collaborate to form microbiomes that can, for example, aid digestion, keep our skin healthy, and maintain ecological habitats. The microbiomes of agriculture fields, surface water, livestock farms, food companies, consumers, and patients are closely interconnected and influence each other across various sectors. Understanding these microbiomes and the complex relationships between them can lead to innovations that address complex societal problems such as climate change and health inequities.

Objectives
The Holomicrobiome project will initiate, integrate, and valorise foundational microbiome research from the complete ‘holomicrobiome’ of the Dutch food system - which extends from fields, wastewater and crops, to farm animals, food, and consumers and patients.

The objectives are to:

  • Coordinate long-term microbiome research and innovation across the domains of agriculture, animal husbandry, healthcare, and water management.
  • Together with partner institutions and coalitions, build a shared database that merges existing and new research and innovation data.
  • Leverage artificial intelligence (AI) and computational modelling to better understand and predict how localised interventions to microbiomes might have desirable effects to one microbiome, but possibly less desirable effects to another.
  • Establish a public/private research institute – the Holomicrobiome Institute.
  • Enable and accelerate the development and market entry of novel microbiome-related innovations that are both safe and societally relevant.
  • Engage with society to co-develop microbiome innovations and transition pathways

Athena’s Role
The Athena Institute will coordinate Living Labs, reflexive monitoring and evaluation, as well as valorisation and outreach within the Holomicrobiome Initiative. This will help to develop transition pathways and mission-driven research and innovation across domains and sectors. These activities will be centred around three different themes: food and food additives for humans and animals, manure and fertilisation, and therapies and interventions. Together with societal partners, universities, knowledge institutes, companies, and medical research institutes, Athena will work towards inclusive and societally relevant Holomicrobiome research and innovations for healthy humans and a sustainable planet.

Project details

Quick links

Homepage Culture on campus VU Sports Centre Dashboard

Study

Academic calendar Study guide Timetable Canvas

Featured

VUfonds VU Magazine Ad Valvas Digital accessibility

About VU

Contact us Working at VU Amsterdam Faculties Divisions
Privacy Disclaimer Safety Web Colophon Cookie Settings Web Archive

Copyright © 2025 - Vrije Universiteit Amsterdam